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Last update: October 2004

 

  

 

 

 

 

 

 

 

Partner 7 - Universités Aix-Marseille I & II

Dr. Bruno Canard and his team have been involved in research on viral replicative enzymes for the past 5 years. The expertise of the group is enzymology, and the subjects studied in the group are developed using an integrated approach that makes use of crystallography, organic chemistry, bio-computing, molecular and cellular biology techniques. The current work of the group addresses the replicative enzymes of a large number of human viral pathogens using structural genomics and functional analyses.

The AFMB laboratory has a large expertise in X-ray crystallography, with an average of 30 new structures solved per year, including structures solved both by NMR and by MAD/SAD techniques. About 70 researchers and technical assistants are working in this laboratory. The group involved in this project consists of researchers from the Virology team of Dr. Bruno Canard.

The Virology team of the AFMB is currently involved in a program dedicated to the cloning/expression/purification/crystallisation of many viral proteins useful for drug design. The technology for automated protein expression and crystallisation has been set-up and is now totally operative. A collaborative network of virology laboratories is providing PCR products corresponding to different viral enzymes or enzyme sub-domains. These products are then subcloned using the Gateway technology and proteins are expressed, purified, and crystallized through a technical platform in work at the AFMB. The platform makes use of robots able to streamline these processes as much as possible, from cloning to the formerly tedious crystal growth and enzymatic characterization.

 

Selected publications Partner 7:

  • Campanacci V., Egloff M.P., Longhi S., Ferron F., Rancurel C., Salomoni A., Durousseau C., Tocque F., Bremond N., Dobbe J.C., Snijder E.J., Canard B., and Cambillau C. 2003. Structural genomics of the SARS coronavirus: cloning, expression, crystallisation and preliminary crystallographic study of the Nsp9 protein. Acta Crystallogr. D Biol. Crystallogr. 59:1628-1631
  • Egloff M.P., Benarroch D., Selisko B., Romette J.L., and Canard B. 2002 An RNA cap (nucleoside-2'-O-) methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterisation. EMBO J. 21:2757-2768.
  • Ferron F., Longhi S., Henrissat B., and Canard B. 2002. Viral RNA-polymerases - A predicted 2'-O-ribose methyltransferase domain shared by all Mononegavirales. Trends Biochem. Sci., 27:222-224.
  • Selmi B., Boretto J., Sarfati S.R., Guerreiro C., and Canard B. 2001. Mechanism-Based Suppression of Dideoxynucleotide Resistance by K65R Human Immunodeficiency Virus Reverse Transcriptase Using an a-Boranophosphate Nucleoside Analogue. J. Biol. Chem. 276:48466-48472.
  • Meyer P., Schneider B., Sarfati S., Deville-Bonne D., Guerreiro C., Boretto J., Janin J., Véron M., and Canard B. 2000. Structural basis for activation of a-boranophosphate nucleotide analogues targeting drug resistant reverse transcriptase. EMBO J. 19:3520-3529.

 

Dr Bruno Canard

bruno.canard@afmb.univ-mrs.fr

 

Dr Jean-Claude Guillemot
Jean-Claude.Guillemot@afmb.univ-mrs.fr

Claire Debarnot
claire.debarnot@afmb.univ-mrs.fr

 

Dr Isabelle Imbert
Isabelle.Imbert@afmb.univ-mrs.fr